Publication 2018
  1. Kuno A, Nishimura K, Takahashi S. Time-course transcriptome analysis of human cellular reprogramming from multiple cell types reveals the drastic change occurs between the mid phase and the late phase. BMC Genomics. 2018. Jan 3;19(1):9. doi: 10.1186/s12864-017-4389-8.

  2. Wakui H, Fuseya S, Suzuki R, Shimbo M, Risa Okada, Hamada H, Kuno A, Hagiwara K, Sato T, Narimatsu H, Kudo T, Takahashi S. Incomplete clearance of apoptotic cells by core 1-derived O-glycan-deficient resident peritoneal macrophages. Biochem Biophys Res Commun. 2018 Jan 8;495(2):2017-2023. doi: 10.1016/j.bbrc.2017.12.066. Epub 2017 Dec 13.

  3. Shawki HH, Oishi H, Usui T, Kitadate Y, Basha WA, Abdellatif AM, Hasegawa K, Okada R, Mochida K, El-Shemy HA, Muratani M, Ogura A, Yoshida S, Takahashi S. MAFB is dispensable for the fetal testis morphogenesis and the maintenance of spermatogenesis in adult mice. PLoS One. 2018 Jan 11;13(1):e0190800. doi: 10.1371/journal.pone.0190800. eCollection 2018.

  4. Katoh MC, Jung Y, Ugbama CM, Shimbo M, Kuno A, Basha WA, Kudo T, Oishi H, Takahashi S. MafB is critical for glucagon production and secretion in mouse pancreatic ƒ¿-cells in vivo. Mol Cell Biol. 2018 Mar 29;38(8). pii: e00504-17. doi: 10.1128/MCB.00504-17. Print 2018 Apr 15.

  5. Nishimura W, Sakaue-Sawano A, Takahashi S, Miyawaki A, Yasuda K, Noda Y . Optical clearing of the pancreas for visualization of mature β-cells and vessels in mice. Islets. 2018 May 4;10(3):e1451282. doi: 10.1080/19382014.2018.1451282. Epub 2018 Apr 4.

  6. Horie K, Kudo T, Yoshinaga R, Akiyama N, Sasanuma H, Kobayashi TJ, Shimbo M, Jeon H, Miyao T, Miyauchi M, Shirakawa M, Shiba D, Yoshida N, Muratani M, Takahashi S, Akiyama T. Long-term hindlimb unloading causes a preferential reduction of medullary thymic epithelial cells expressing autoimmune regulator (Aire). Biochem Biophys Res Commun. 2018 May 15. pii: S0006-291X(18)31115-X. doi: 10.1016/j.bbrc.2018.05.060.

  7. Sato Y, Tsukaguchi H, Morita H, Koichiro H, Tran MTN, Hamada M, Usui T, Morito N, Horita S, Hayashi T, Takagi J, Yamaguchi I, Nguyen HT, Harada M, Inui K, Maruta Y, Inoue Y, Koiwa F, Sato H, Matsuda F, Ayabe S, Mizuno S, Sugiyama F, Takahashi S, Yoshimura A. MafB mutation causes Focal Segmental Glomerulosclerosis with Duane Retraction Syndrome. Kidney Int. 2018 May 17. pii: S0085-2538(18)30216-3. doi: 10.1016/j.kint.2018.02.025.

  8. Herz K, Becker A, Shi C, Ema M, Takahashi S, Potente M, Hesse M, Fleischmann BK, Wenzel D. Visualization of endothelial cell cycle dynamics in mouse using the Flt-1/eGFP-anillin system. Angiogenesis. 2018 May;21(2):349-361. doi: 10.1007/s10456-018-9601-1. 

  9. Matsumoto T, Kaifuchi N, Mizuhara Y, Warabi E, Watanabe J. Use of a Caco-2 permeability assay to evaluate the effects of several Kampo medicines on the drug transporter P-glycoprotein. J Nat Med. 2018 Sep;72(4):897-904. doi: 10.1007/s11418-018-1222-x. Epub 2018 May 24.

  10. Wang Z, Ma J, Miyoshi C, Li Y, Sato M, Ogawa Y, Lou T, Ma C, Gao X, Lee C, Fujiyama T, Yang X, Zhou S, Hotta-Hirashima N, Klewe-Nebenius D, Ikkyu A, Kakizaki M, Kanno S, Cao L, Takahashi S, Peng J, Yu Y, Funato H, Yanagisawa M, Liu Q .Quantitative phosphoproteomic analysis of the molecular substrates of sleep need. Nature.2018 Jun;558(7710):435-439. doi: 10.1038/s41586-018-0218-8. Epub 2018 Jun 13.

  11. Kikuchi K, Iida M, Ikeda N, Moriyama S, Hamada M, Takahashi S, Kitamura H, Watanabe T, Hasegawa Y, Hase K, Fukuhara T, Sato H, Kobayashi EH, Suzuki T, Yamamoto M, Tanaka M, Asano K. Macrophages Switch Their Phenotype by Regulating Maf Expression during Different Phases of Inflammation. J Immunol. 2018 Jul 15;201(2):635-651. doi: 10.4049/jimmunol.1800040. Epub 2018 Jun 15.

  12. Mali GR, Yeyati PL, Mizuno S, Dodd DO, Tennant PA, Keighren MA, Zur Lage P, Shoemark A, Garcia-Munoz A, Shimada A, Takeda H, Edlich F, Takahashi S, von Kreisheim A, Jarman AP, Mill P. ZMYND10 functions in a chaperone relay during axonemal dynein assembly. Elife. 2018 Jun 19;7. pii: e34389. doi: 10.7554/eLife.34389.

  13. Toki T, Yoshida K, Wang R, Nakamura S, Maekawa T, Goi K, Katoh MC, Mizuno S, Sugiyama F, Kanezaki R, Uechi T, Nakajima Y, Sato Y, Okuno Y, Sato-Otsubo A, Shiozawa Y, Kataoka K, Shiraishi Y, Sanada M, Chiba K, Tanaka H, Terui K, Sato T, Kamio T, Sakaguchi H, Ohga S, Kuramitsu M, Hamaguchi I, Ohara A, Kanno H, Miyano S, Kojima S, Ishiguro A, Sugita K, Kenmochi N, Takahashi S, Eto K, Ogawa S, Ito E. De Novo Mutations Activating Germline TP53 in an Inherited Bone-Marrow-Failure Syndrome. Am J Hum Genet. 2018 Sep 6;103(3):440-447. doi: 10.1016/j.ajhg.2018.07.020. Epub 2018 Aug 23.

  14. Mao XW, Byrum S, Nishiyama NC, Pecaut MJ, Sridharan V, Boerma M, Tackett AJ, Shiba D, Shirakawa M, Takahashi S, Delp MD. Impact of Spaceflight and Artificial Gravity on the Mouse Retina: Biochemical and Proteomic Analysis. Int J Mol Sci. 2018 Aug 28;19(9). pii: E2546. doi: 10.3390/ijms19092546.

  15. Ishii T, Warabi E, Mann GE. Circadian control of BDNF-mediated Nrf2 activation in astrocytes protects dopaminergic neurons from ferroptosis. Free Radic Biol Med. 2018 Sep 4. pii: S0891-5849(18)31523-5. doi: 10.1016/j.freeradbiomed.  2019 Mar;133:169-178. doi: 10.1016/j.freeradbiomed.2018.09.002. Epub 2018 Sep 4..

  16. Sumitomo A, Yukitake H, Hirai K, Horike K, Ueta K, Chung Y, Warabi E, Yanagawa T, Kitaoka S, Furuyashiki T, Narumiya S, Hirano T, Niwa M, Sibille E, Hikida T, Sakurai T, Ishizuka K, Sawa A, Tomoda T.Ulk2 controls cortical excitatory-inhibitory balance via autophagic regulation of p62 and GABAA receptor trafficking in pyramidal neurons. Hum Mol Genet. 2018 Sep 15;27(18):3165-3176. doi: 10.1093/hmg/ddy219.

  17. Kulathunga K, Hamada M, Hiraishi1 Y, Otake M, Tran MTN, Cheng O, Tanaka J, Sakasai T, Sakaguchi S, Sugiyama Y, Fleischmann BK, Takahashi1 S, Miwa Y. A Novel iRFP-Incorporated in vivo Murine 1 Atherosclerosis Imaging System. Sci Rep,2018 Sep 28;8(1):14515. doi: 10.1038/s41598-018-32456-5.

  18. Festuccia1 N, ,Halbritter F, Corsinotti A, Gagliardi A, Colby D, Simon R, Tomlinson SR ,Chambers I. Esrrb extinction triggers dismantling of naïve pluripotency and marks commitment to differentiation. EMBO J. 2018, e95476, doi 10.15252/embj.201695476 | Published online 01.10.2018.

  19. Honda T, Fujiyama T, Miyoshi C, Ikkyu A, Hotta-Hirashima N, Kanno S, Mizuno S, Sugiyama F, Takahashi S, Funato H, Yanagisawa M. A single phosphorylation site of SIK3 regulates daily sleep amounts and sleep need in mice. Proc Natl Acad Sci U S A. 2018 Oct 9;115(41):10458-10463. doi: 10.1073/pnas.1810823115. Epub 2018 Sep 25.

  20. Azami T, Matsumoto K, Jeon H, Waku T, Muratani M, Niwa H, Takahashi S, Ema M. Klf5 suppresses ERK signaling in mouse pluripotent stem cells. PLoS One. 2018 Nov 19;13(11):e0207321. doi: 10.1371/journal.pone.0207321. eCollection 2018.

  21. Hori Y, Tanimoto Y, Takahashi S, Furukawa T, Koshiba-Takeuchi K, Takeuchi JK. Important cardiac transcription factor genes are accompanied by bidirectional long non-coding RNAs. BMC Genomics. 2018 Dec 27;19(1):967. doi: 10.1186/s12864-018-5233-5.